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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805125.1_cds_XP_016492331.1_8253
CDS Infomation

[gene=LOC107811850] [db_xref=GeneID:107811850] [protein=stress response protein NST1-like] [protein_id=XP_016492331.1] [location=join(5048..5215,6788..6935,7652..7747,8473..8549,9344..9426,9642..9702,9885..9952,10043..10124,10822..10905,11000..11077,11536..11655,12284..12460)] [gbkey=CDS]
Sequence

ATGTCAGGTGTATCACTGAAGTGTGGTGATTGTGGAACTCTCTTCAAATCTGTAGAAGAA
GCACAAGAACACGCCGAAGTTACTTCTCATGCTAACTTCAGTGAGTCCACCGAAGCTGTT
CTTAATCTCGTCTGCACCGCTTGTGGCAAACCTTGCCGCTCCAAAACGGAGAGTGATTTG
CACAAGAAGAGAACTGGGCACACAGAGTTTACGGACAAGACTGCAGAGGCAGTGAAGCCA
ATCAGCTTGGAGGCGCCAAAGGCAAAGGCTGATGATGATGAAGACATGGCAGAGGGTGGT
GATGACAGTGGTACTGAAATGGTTGTTCCTGAAGTTGACCAAAATTTGCTATCAGAACTC
GAGACAATGGGGTTTCCCAAAGCTAGGGCTATCCGTGCACTTCACTTTTCTGGCAATGCC
AGCTTGGAGGCTGCTGTAAATTGGGTTGTAGAGCATGAAAGTGACCCGGACATTGATGAA
ACACCACTGGTACCTGCCAGTGCCAAGAAAGCTGAGGCTCCAAAGCCTTCTCTTACTCCA
GAGGAAATAAAGAAGAAACAAGAAGAGTTGAGGGAGCGTGCTCGTAAAAAGAAAGAAGAG
GAAGAGAGACAAAGGGAAAGAGAGAGAGAAAAGGAAAGAATTAGAATTGGTAAGGAACTC
CTGGAAGCTAAACGGATGGAAGAAGAGAATGAAAGAAAACGCATAATAGCATTGCGCAAG
GCCGAAAAAGCGGAAGAACAACGAGCTAGGGAGAAAATTCGTCAGAAACTGGAAGAGGAT
AAGGCCGAAAGAAGAAGGAAACTCGGTTTGCCAGCAGAAGATCCTGCTCCCGCCAAACCT
TCTACACCTGTTGTGGAGGAAAAGAAGATCACATTGCCTGTCAGACCAGCTACAAAGGCA
GAGCGGATGAGGGAGTGCCTGAGAACACTTAAACAGACCCACAAGGATGATGAGGCCAAA
GTCAAGACCGCTTTCAACACACTGCTAACTTATGCAAAGAATGTCGCAACAAATCCCAAT
GAGGAGAAATATCGCAAAATTAGACTTAGCAATGCTGCTTTTCAGGATAGAATCGGCAAG
CTGCAAGGAGGCATTGAGTTTCTTGAGCACTGTGGATTTGAGAAAATTGAAGGGGGTGAA
TTCTTGTACCTGCCAAGAGAAAAGGTGGACATGGCAGTTCTTAATACTGCTGGGACTGAG
CTGAACAATGCCATTAAAAATCCCTTCTTTGGAGTCCTCTAA

Peptide Sequence

PEP ID

XP_016492331.1
PEP Infomation

PREDICTED: stress response protein NST1-like [Nicotiana tabacum]
Sequence

MSGVSLKCGDCGTLFKSVEEAQEHAEVTSHANFSESTEAVLNLVCTACGKPCRSKTESDL
HKKRTGHTEFTDKTAEAVKPISLEAPKAKADDDEDMAEGGDDSGTEMVVPEVDQNLLSEL
ETMGFPKARAIRALHFSGNASLEAAVNWVVEHESDPDIDETPLVPASAKKAEAPKPSLTP
EEIKKKQEELRERARKKKEEEERQREREREKERIRIGKELLEAKRMEEENERKRIIALRK
AEKAEEQRAREKIRQKLEEDKAERRRKLGLPAEDPAPAKPSTPVVEEKKITLPVRPATKA
ERMRECLRTLKQTHKDDEAKVKTAFNTLLTYAKNVATNPNEEKYRKIRLSNAAFQDRIGK
LQGGIEFLEHCGFEKIEGGEFLYLPREKVDMAVLNTAGTELNNAIKNPFFGVL

Transcript Sequence

Gene sequence data has not been registered.